TCRpMHC model viewer
Job ID : MHC2AEW_210923_114643
Status : Modeling completed
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Name | Template PDB |
---|---|
Tcr α CDR1 | 4gg6_E |
Tcr α CDR2-HV4 | 4gg6_E |
Tcr α CDR3 | 4gg6_E |
Tcr α framework | NA |
Tcr α germline | 4gg6_E |
Tcr β CDR1 | 5ksa_D |
Tcr β CDR2-HV4 | 5ksa_D |
Tcr β CDR3 | 4gg6_F |
Tcr β framework | NA |
Tcr β germline | 5ksa_D |
Peptide | 4z7w |
MHC I | NA |
MHC II | 4z7w |
TCR orientation | 4z7w |
pMHC orientation | NA |
TCRpMHC orientation | 4z7w |
Segments | Template | Alignment |
---|---|---|
CDR1α | 4gg6_E |
|
CDR2α | 4gg6_E |
|
CDR3α | 4gg6_E |
|
CDR1β | 5ksa_D |
|
CDR2β | 5ksa_D |
|
CDR3β | 4gg6_F |
|
Peptide | 4z7w |
|
Name | Sequence |
---|---|
Tcr α V domain | KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLTSNVNNRMASLAIAEDRKSSTLILHRATLRDAAVYYCILRDGRGGADGLTFGKGTHLIIQ |
Tcr α framework | KTTQPNSMESNEEEPVHLPCWYRQLPSQGPEYVLILHRATLRDAAVYYCFGKGTHLIIQ |
Tcr α CDR1 | NHSTISGTDYIH |
Tcr α CDR2-HV4 | IHGLTSNVNNRMASLAIAEDRKSST |
Tcr α CDR3 | ILRDGRGGADGLT |
Tcr β V domain | VTQTPKHLITATGQRVTLRCSPRSGDLSVYWYQQSLDQGLQFLIQYYNGEERAKGNILERFSAQQFPDLHSELNLSSLELGDSALYFCASSVAVSAGTYEQYFGPGTRLTVT |
Tcr β framework | VTQTPKHLITATGQRVTLRCWYQQSLDQGLQFLLNLSSLELGDSALYFCFGPGTRLTVT |
Tcr β CDR1 | SPRSGDLSVY |
Tcr β CDR2-HV4 | IQYYNGEERAKGNILERFSAQQFPDLHSE |
Tcr β CDR3 | ASSVAVSAGTYEQY |
Peptide | FQPSQENPQ |
MHC1 α | NA |
MHC2 α | IVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFALTNIAVLKHNLNIVIKRSNSTAAT |
MHC2 β | SPEDFVYQFKGMCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVTPLGPPAAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQR |