TCRmodel Logo

TCRmodel

Automated high resolution modeling of T cell receptors

Display as:

Color by:


Top-ranked model

How to interpret these scores?

PDB pLDDT CDR3α pLDDT CDR3β pLDDT pTM ipTM TCR-pMHC ipTM Model confidence*
ranked_0 94.82 89.92 91.63 0.90 0.88 0.86 0.88
ranked_1 94.48 91.74 93.44 0.90 0.88 0.86 0.88
ranked_2 94.68 87.94 91.62 0.90 0.87 0.85 0.88
ranked_3 94.95 91.85 91.40 0.90 0.87 0.84 0.87
ranked_4 93.97 88.06 90.77 0.88 0.85 0.82 0.85
* Model confidence >= 0.85 - model likely good. Model confidence <= 0.49 - model likely not good.

Name Templates CDR3 Sequences V gene J gene
TCRα 6cph_D
  • CAFKAAGNKLTF
  • TRAV24*01
  • TRAJ17*01
5d2l_E
  • CAFITGNQFYF
  • TRAV24*01
  • TRAJ49*01
6vmx_D
  • CAFGSSNTGKLIF
  • TRAV24*01
  • TRAJ37*01
3gsn_A
  • CARNTGNQFYF
  • TRAV24*01
  • TRAJ49*01
Input:
  • CALITGGGNKLTF
  • TRBV6-2*01
  • TRBJ2-3*01
TCRβ 6cug_E
  • CASSMPGLRSSYEQYF
  • TRBV6-2*01
  • TRBJ2-7*01
4y19_E
  • CASRPRRDNEQFF
  • TRBV6-2*01
  • TRBJ2-1*01
4x6b_B
  • CASRYFLPTQGMGAFF
  • TRBV6-2*01
  • TRBJ1-1*01
4y1a_E
  • CASRPRDPVTQYF
  • TRBV6-2*01
  • TRBJ2-3*01
Input:
  • CASRLQGWNSPLHF
  • TRBV6-2*01
  • TRBJ2-3*01

Templates
pMHC 6cql, 2wbj, 4y19, 3o6f