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TCRmodel

Automated high resolution modeling of T cell receptors

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Top-ranked model

How to interpret these scores?

PDB pLDDT CDR3α pLDDT CDR3β pLDDT pTM ipTM TCR-pMHC ipTM Model confidence*
ranked_0 95.68 81.71 92.33 0.90 0.88 0.85 0.88
ranked_1 89.24 73.60 64.89 0.68 0.57 0.39 0.59
ranked_2 89.76 73.23 66.81 0.67 0.56 0.37 0.58
ranked_3 89.14 74.50 66.68 0.63 0.51 0.28 0.53
ranked_4 89.60 75.20 67.01 0.62 0.50 0.27 0.53
* Model confidence >= 0.85 - model likely good. Model confidence <= 0.49 - model likely not good.

Name Templates CDR3 Sequences V gene J gene
TCRα 4y1a_D
  • CAASSSAGGTSYGKLTF
  • TRAV29/DV5*01
  • TRAJ52*01
1bd2_D
  • CAAMEGAQKLVF
  • TRAV29/DV5*01
  • TRDJ1*01
6c09_C
  • CAASVGDKIIF
  • TRAV29/DV5*01
  • TRDJ1*01
2p1y_A
  • CASGDLGQTNERLFFCAAIDTNAYKVIF
  • TRBV13-2*01
  • TRBJ1-4*01
Input:
  • CAAIGGSTLGRLYF
  • TRAV29/DV5*01
  • TRDJ2*01
TCRβ 6tro_E
  • CASSFLMTSGDPYEQYF
  • TRBV28*01
  • TRBJ2-7*01
6avf_B
  • CASSQRQEGDTQYF
  • TRBV28*01
  • TRBJ2-3*01
5d7k_E
  • CASSPSGYQETQYF
  • TRBV28*01
  • TRBJ2-5*01
5d7l_E
  • CASSPSGYQETQYF
  • TRBV28*01
  • TRBJ2-5*01
Input:
  • CASSPIKDTRQEYTGELFF
  • TRBV28*01
  • TRBJ2-2*01

Templates
pMHC 5brz, 4nqv, 4nqx, 5bs0