TCRmodel Logo

TCRmodel

Automated high resolution modeling of T cell receptors

Display as:

Color by:


Top-ranked model

How to interpret these scores?

PDB pLDDT pTM ipTM TCR-pMHC ipTM I-pLDDT Model confidence*
ranked_0 95.42 0.89 0.87 0.84 86.82 0.87
ranked_1 92.84 0.84 0.79 0.73 76.78 0.80
ranked_2 90.91 0.78 0.71 0.60 70.06 0.72
ranked_3 89.27 0.63 0.51 0.30 65.97 0.54
ranked_4 89.78 0.63 0.50 0.29 65.11 0.53
* Model confidence >= 0.85 - model likely good. Model confidence <= 0.49 - model likely not good.

Name Templates CDR3 Sequences V gene J gene
TCRα 4y1a_D
  • CAASSSAGGTSYGKLTF
  • TRAV29/DV5*01
  • TRAJ52*01
1bd2_D
  • CAAMEGAQKLVF
  • TRAV29/DV5*01
  • TRDJ1*01
6c09_C
  • CAASVGDKIIF
  • TRAV29/DV5*01
  • TRDJ1*01
2p1y_A
  • CASGDLGQTNERLFF
  • TRBV13-2*01
  • TRBJ1-4*01
Input:
  • CAAIGGSTLGRLYF
  • TRAV29/DV5*01
  • TRDJ2*01
TCRβ 6tro_E
  • CASSFLMTSGDPYEQYF
  • TRBV28*01
  • TRBJ2-7*01
6avf_B
  • CASSQRQEGDTQYF
  • TRBV28*01
  • TRBJ2-3*01
5d7k_E
  • CASSPSGYQETQYF
  • TRBV28*01
  • TRBJ2-5*01
5d7l_E
  • CASSPSGYQETQYF
  • TRBV28*01
  • TRBJ2-5*01
Input:
  • CASSPIKDTRQEYTGELFF
  • TRBV28*01
  • TRBJ2-2*01

Templates
pMHC 5brz, 4nqv, 4nqx, 5bs0